BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H09LP1|AL428462
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1615 0.0
3x_Contig1088 142 1e-33
3x_Contig727 142 1e-33
3x_Contig631 142 1e-33
3x_Contig582 142 1e-33
3x_Contig1747 140 5e-33
3x_Contig1718 140 5e-33
3x_Contig1204 140 5e-33
>3x_Contig1376
Length = 7449
Score = 1615 bits (808), Expect = 0.0
Identities = 860/882 (97%), Gaps = 2/882 (0%)
Strand = Plus / Plus
Query: 1 tattaatttatcactttttttttawtttaagtgtacacagggaccagtgaatgagaacac 60
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 5869 tattaatttatcactttttttttattttaagtgttcacagggaccagtgaatgagaacac 5928
Query: 61 gaaaagagtcaaaatacagtagaatgtgggagagatgtataactgtctttgggagttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5929 gaaaagagtcaaaatacagtagaatgtgggagagatgtataactgtctttgggagttcag 5988
Query: 121 ttgcgggaatgcacactagccccttctcattctcatcactatagacagcaataaaacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5989 ttgcgggaatgcacactagccccttctcattctcatcactatagacagcaataaaacccc 6048
Query: 181 gtgtttctcgaaccaratcagttwcagaatatctacagaaaaaaaaatacttggtgaact 240
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6049 gtgtttctcgaaccagatcagtttcagaatatctacagaaaaaaaaatacttggtgaact 6108
Query: 241 tcatatctgctagtagagtgatgattcctttcagaaataaggggcatgatccgcagcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6109 tcatatctgctagtagagtgatgattcctttcagaaataaggggcatgatccgcagcagt 6168
Query: 301 tataactgtagcaawmaatattattctgtttgtgaacattatgtagtatgcgagatctgg 360
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6169 tataactgtagcattcattattattctgtttgtgaacattatgtagtatgcgagatctgg 6228
Query: 361 taacgtgattcactcgtattcgttgccttgttaaaacatagaagccgtaaawagtagtgt 420
|||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 6229 taacgtgattgactcgtattcgttgccttgttaaaacatagaagccgtgaatagtagtgt 6288
Query: 421 cgagttttgagtcaacaagcagatggtcgatctagaagaaaaattaaagggcaggagggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6289 cgagttttgagtcaacaagcagatggtcgatctagaagaaaaattaaagggcaggagggg 6348
Query: 481 gcggagttatgtacccatagttggagtcagagtagacttatctgctctaaaagtagaaag 540
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6349 gcagagttatgtacccatagttggagtcag-gtagacttatctgctctaaaagtagaaag 6407
Query: 541 ttgtscgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaa 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 ttgtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaa 6467
Query: 601 ttccccgtcgcggagtgattttttatatatttttattttttagtaacttacattccttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 ttccccgtcgcggagtgattttttatatatttttattttttagtaacttacattccttca 6527
Query: 661 ggtaaaggtcacaacgcgagtttgcwagaattaacgatgagttgtgtgttaactttgaat 720
||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct: 6528 ggtaaaggtcacaacgcgagtatgctagaattaacgatgagttgtgtgtgaactttgaat 6587
Query: 721 gaattacaaggaatggktaaaagttatccaaaactacttatacaagggaaaattgttaca 780
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6588 gaattacaaggaatggttaaaagttatccaaaactacttatacaagggaaaattgttaca 6647
Query: 781 atttttttttcttttaaataccattgggarcacagctgaagactgagccatatgcatctg 840
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 6648 atttttttttcttttaaataccattggaagcacagctgaagactgagccatatgcatctg 6707
Query: 841 attgg-aattgtmaatgatactttgaacagtagcgtatagac 881
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 6708 attggaaattgtaaatgatactttgaacagtagcgtatagac 6749
>3x_Contig1088
Length = 4585
Score = 142 bits (71), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 543 gtscgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 602
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1498
Query: 603 ccccgtcgcggag 615
|||||||||||||
Sbjct: 1499 ccccgtcgcggag 1511
>3x_Contig727
Length = 2486
Score = 142 bits (71), Expect = 1e-33
Identities = 77/79 (97%)
Strand = Plus / Minus
Query: 546 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 1112
Query: 606 cgtcgcggagtgatttttt 624
|||||||||| |||||||
Sbjct: 1111 cgtcgcggaggaatttttt 1093
>3x_Contig631
Length = 2339
Score = 142 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Minus
Query: 546 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 1019
Query: 606 cgtcgcggagt 616
|||||||||||
Sbjct: 1018 cgtcgcggagt 1008
>3x_Contig582
Length = 2827
Score = 142 bits (71), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 543 gtscgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 602
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1772
Query: 603 ccccgtcgcggag 615
|||||||||||||
Sbjct: 1773 ccccgtcgcggag 1785
>3x_Contig1747
Length = 15671
Score = 140 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 546 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 2401
Query: 606 cgtcgcggag 615
||||||||||
Sbjct: 2400 cgtcgcggag 2391
>3x_Contig1718
Length = 19496
Score = 140 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 546 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4330 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 4271
Query: 606 cgtcgcggag 615
||||||||||
Sbjct: 4270 cgtcgcggag 4261
>3x_Contig1204
Length = 5869
Score = 140 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 546 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5720 cgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccc 5779
Query: 606 cgtcgcggag 615
||||||||||
Sbjct: 5780 cgtcgcggag 5789
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8056
Number of Sequences: 1807
Number of extensions: 8056
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 8
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)